AT5G53480


Description : ARM repeat superfamily protein


Gene families : OG_01_0002023 (Gene family) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G53480
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.90 No alias 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.02 Gene family
GSVIVT01038575001 No alias 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.1 Gene family
LOC_Os12g38110 Os12g0568800 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.04 Gene family
MA_12771g0010 No alias 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.04 Gene family
Smo158150 PACid_15412758 No description available 0.03 Gene family
Solyc03g082940.3.1 Solyc03g082940.3 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.05 Gene family
Zm00001d030694 GRMZM2G138419 29.3.1 protein.targeting.nucleus ARM repeat superfamily protein 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005643 nuclear pore ISS Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006606 protein import into nucleus IDA Arabidopsis.org
MF GO:0008565 protein transporter activity IDA Arabidopsis.org
MF GO:0008565 protein transporter activity ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0052541 plant-type cell wall cellulose metabolic process RCA Arabidopsis.org
BP GO:0052546 cell wall pectin metabolic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 101
No external refs found!