AT5G53430 (SET29, SDG29, ATX5)


Aliases : SET29, SDG29, ATX5

Description : SET domain group 29


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G53430
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
MA_10426105g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
MA_18041g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Smo142359 PACid_15411889 No description available 0.02 Gene family
Smo164635 PACid_15412034 No description available 0.02 Gene family
Solyc01g095890.3.1 Solyc01g095890.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Solyc03g083410.3.1 Solyc03g083410.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009294 DNA mediated transformation IMP Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000313 PWWP_dom 222 318
IPR001214 SET_dom 912 1017
IPR019787 Znf_PHD-finger 415 468
No external refs found!