AT5G53130 (ATCNGC1, CNGC1)


Aliases : ATCNGC1, CNGC1

Description : cyclic nucleotide gated channel 1


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G53130
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023608001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os03g55100 Os03g0758300 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g098210.3.1 Solyc03g098210.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc07g005590.3.1 Solyc07g005590.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc12g010010.2.1 Solyc12g010010.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IGI Arabidopsis.org
MF GO:0005242 inward rectifier potassium channel activity IGI Arabidopsis.org
MF GO:0005261 cation channel activity ISS Arabidopsis.org
MF GO:0005516 calmodulin binding IEP Arabidopsis.org
MF GO:0005516 calmodulin binding ISS Arabidopsis.org
MF GO:0005516 calmodulin binding TAS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0006813 potassium ion transport IGI Arabidopsis.org
BP GO:0006816 calcium ion transport IGI Arabidopsis.org
MF GO:0030551 cyclic nucleotide binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 507 597
IPR005821 Ion_trans_dom 94 413
No external refs found!