AT5G52470 (FIB1, ATFIB1, ATFBR1,...)


Aliases : FIB1, ATFIB1, ATFBR1, FBR1, SKIP7

Description : fibrillarin 1


Gene families : OG_01_0004803 (Gene family) Phylogenetic Tree(s): OG0004803_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G52470
Cluster HCCA cluster: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AT4G25630 FIB2, ATFIB2 fibrillarin 2 0.03 Gene family
Cpa|evm.model.tig00001049.16 No alias No description available 0.02 Gene family
Cre02.g077300 No alias No description available 0.02 Gene family
GSVIVT01028887001 No alias No description available 0.05 Gene family
LOC_Os02g57590 Os02g0821800 No description available 0.07 Gene family
LOC_Os05g08360 Os05g0176000 No description available 0.05 Gene family
Smo171051 PACid_15405843 No description available 0.04 Gene family
Solyc03g025270.3.1 Solyc03g025270.3 No description available 0.02 Gene family
Zm00001d051885 GRMZM2G150648 No description available 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing RCA Arabidopsis.org
BP GO:0001510 RNA methylation IGI Arabidopsis.org
BP GO:0001510 RNA methylation RCA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005730 nucleolus ISS Arabidopsis.org
BP GO:0006364 rRNA processing IGI Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0016571 histone methylation RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination RCA Arabidopsis.org
MF GO:0030515 snoRNA binding ISS Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000692 Fibrillarin 71 298
No external refs found!