AT5G52250 (RUP1)


Aliases : RUP1

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0004303 (Gene family) Phylogenetic Tree(s): OG0004303_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G52250
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Solyc11g005190.2.1 Solyc11g005190.2 33.99 development.unspecified Transducin/WD40... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005834 heterotrimeric G-protein complex ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009744 response to sucrose RCA Arabidopsis.org
BP GO:0009813 flavonoid biosynthetic process RCA Arabidopsis.org
BP GO:0010114 response to red light IEP Arabidopsis.org
BP GO:0010218 response to far red light IEP Arabidopsis.org
BP GO:0010224 response to UV-B IGI Arabidopsis.org
BP GO:0010224 response to UV-B IEP Arabidopsis.org
BP GO:0010224 response to UV-B RCA Arabidopsis.org
BP GO:0043496 regulation of protein homodimerization activity IDA Arabidopsis.org
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 163 196
IPR001680 WD40_repeat 290 328
IPR001680 WD40_repeat 248 283
No external refs found!