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  5. Nbi_g33552

Nbi_g33552


Description : not classified & original description: none


Gene families : OG0001784 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g33552
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00144840 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 39 species
Aev_g23346 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ala_g15664 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g27955 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Cba_g31453 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ceric.27G056700.1 Ceric.27G056700 not classified & original description: pacid=50604842... 0.03 OrthoFinder output from all 39 species
Dac_g44938 No alias not classified & original description: none 0.12 OrthoFinder output from all 39 species
Dcu_g07811 No alias not classified & original description: none 0.08 OrthoFinder output from all 39 species
Dde_g00105 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Len_g38034 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ore_g02002 No alias not classified & original description: none 0.07 OrthoFinder output from all 39 species
Pir_g55050 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g44381 No alias not classified & original description: none 0.08 OrthoFinder output from all 39 species
Solyc10g048060.2.1 ORF107A, Solyc10g048060 Uncharacterized mitochondrial protein AtMg00030... 0.01 OrthoFinder output from all 39 species
Spa_g19621 No alias not classified & original description: none 0.16 OrthoFinder output from all 39 species
Tin_g24620 No alias not classified & original description: none 0.15 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!