AT5G49620 (AtMYB78, MYB78)


Aliases : AtMYB78, MYB78

Description : myb domain protein 78


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G49620
Cluster HCCA cluster: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G15310 ATMIXTA, MYB16, ATMYB16 myb domain protein 16 0.04 Gene family
LOC_Os02g02370 Os02g0114800 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os04g50680 Os04g0593200 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os12g37690 Os12g0564100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_10427849g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_10431212g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_31666g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Smo39481 PACid_15418103 No description available 0.01 Gene family
Solyc02g067340.3.1 Solyc02g067340.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc02g086683.1.1 Solyc02g086683.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Zm00001d009435 GRMZM2G119693 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d026197 GRMZM2G081557 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Zm00001d038878 GRMZM2G175232 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d052069 GRMZM2G015021 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009737 response to abscisic acid IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 28 75
IPR001005 SANT/Myb 81 124
No external refs found!