AT5G48780


Description : disease resistance protein (TIR-NBS class)


Gene families : OG_01_0000007 (Gene family) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G48780
Cluster HCCA cluster: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G27170 No alias transmembrane receptors;ATP binding 0.04 Gene family
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Gene family
AT1G72910 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.04 Gene family
AT5G17970 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Gene family
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Gene family
AT5G46450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Gene family
GSVIVT01004867001 No alias 20.1.7 stress.biotic.PR-proteins disease resistance... 0.04 Gene family
GSVIVT01025918001 No alias 20.1.7 stress.biotic.PR-proteins disease resistance... 0.03 Gene family
GSVIVT01038755001 No alias 20.1.2 stress.biotic.receptors transmembrane receptorsATP binding 0.04 Gene family
MA_10437104g0020 No alias 20.1.7 stress.biotic.PR-proteins disease resistance... 0.02 Gene family
MA_31007g0010 No alias 20.1.7 stress.biotic.PR-proteins disease resistance... 0.02 Gene family
MA_62544g0010 No alias 20.1.2 stress.biotic.receptors transmembrane receptorsATP binding 0.03 Gene family
MA_6395g0010 No alias 20.1.2 stress.biotic.receptors transmembrane receptorsATP binding 0.01 Gene family
MA_741636g0010 No alias 20.1.2 stress.biotic.receptors transmembrane receptorsATP binding 0.02 Gene family
MA_928125g0010 No alias No description available 0.09 Gene family
Solyc02g082050.3.1 Solyc02g082050.3 20.1.7 stress.biotic.PR-proteins disease resistance... 0.02 Gene family
Solyc11g011060.2.1 Solyc11g011060.2 20.1.7 stress.biotic.PR-proteins disease resistance... 0.03 Gene family
Solyc11g011350.2.1 Solyc11g011350.2 20.1.7 stress.biotic.PR-proteins disease resistance... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006952 defense response ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000157 TIR_dom 11 183
IPR002182 NB-ARC 454 665
IPR002182 NB-ARC 205 404
No external refs found!