AT5G47700


Description : 60S acidic ribosomal protein family


Gene families : OG_01_0001742 (Gene family) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G47700
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000342.4 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.03 Gene family
Cre17.g738300 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.2 Gene family
GSVIVT01019679001 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.17 Gene family
GSVIVT01027436001 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01038637001 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.23 Gene family
LOC_Os08g02340 Os08g0116500 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.23 Gene family
MA_10430200g0010 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.03 Gene family
MA_90134g0010 No alias 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.04 Gene family
Smo133023 PACid_15405140 No description available 0.09 Gene family
Solyc01g006160.3.1 Solyc01g006160.3 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.03 Gene family
Solyc01g016470.3.1 Solyc01g016470.3 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.16 Gene family
Solyc01g104370.3.1 Solyc01g104370.3 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d035087 GRMZM2G032315 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.35 Gene family
Zm00001d049674 GRMZM2G157443 29.2.1.2.2.81 protein.synthesis.ribosomal... 0.3 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006414 translational elongation ISS Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!