AT5G44160 (NUC)


Aliases : NUC

Description : C2H2-like zinc finger protein


Gene families : OG_01_0000145 (Gene family) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G44160
Cluster HCCA cluster: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT1G25250 IDD16, AtIDD16 indeterminate(ID)-domain 16 0.03 Gene family
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.03 Gene family
GSVIVT01003119001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
GSVIVT01010961001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
GSVIVT01025166001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
GSVIVT01031112001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
LOC_Os01g39110 Os01g0572300 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
LOC_Os03g13400 Os03g0237250 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc07g053570.3.1 Solyc07g053570.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d008842 GRMZM2G046290 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
Zm00001d032922 GRMZM2G011357 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0006826 iron ion transport RCA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0010106 cellular response to iron ion starvation RCA Arabidopsis.org
BP GO:0010167 response to nitrate RCA Arabidopsis.org
BP GO:0010260 animal organ senescence IMP Arabidopsis.org
BP GO:0015706 nitrate transport RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IMP Arabidopsis.org
BP GO:0048573 photoperiodism, flowering IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!