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  5. Smo113786

Smo113786


Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)


Gene families : OG_01_0000137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000137_tree ,
OG_02_0000296 (LandPlants) Phylogenetic Tree(s): OG_02_0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo113786
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00210p00019190 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.02 Archaeplastida
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 Archaeplastida
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 Archaeplastida
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.02 Archaeplastida
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 Archaeplastida
GSVIVT01011487001 No alias External stimuli response.temperature.temperature... 0.04 Archaeplastida
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01027087001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
GSVIVT01028711001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01029407001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
Gb_10882 No alias Probable cyclic nucleotide-gated ion channel 20,... 0.03 Archaeplastida
Gb_31243 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
LOC_Os02g41710.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
LOC_Os04g55080.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
LOC_Os06g08850.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.03 Archaeplastida
Solyc05g050350.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc05g050360.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Solyc05g050380.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc07g005590.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc07g006510.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc08g069140.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc12g010010.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Zm00001e006772_P003 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Zm00001e030701_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Zm00001e034885_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
AMTR_s00006p00268380 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.02 LandPlants
AMTR_s00210p00019190 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.03 LandPlants
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.02 LandPlants
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.02 LandPlants
GSVIVT01023608001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 LandPlants
GSVIVT01027087001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 LandPlants
GSVIVT01028711001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 LandPlants
Gb_31243 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
LOC_Os06g08850.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
LOC_Os06g33570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Mp4g04110.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.01 LandPlants
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.02 LandPlants
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Solyc07g005590.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Solyc07g006510.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Solyc12g010010.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Zm00001e006772_P003 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Zm00001e016088_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Zm00001e024846_P003 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Zm00001e030701_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 518 605
No external refs found!