AT5G43900 (XI-6, ATMYA2, XI-2, MYA2)


Aliases : XI-6, ATMYA2, XI-2, MYA2

Description : myosin 2


Gene families : OG_01_0000117 (Gene family) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G43900
Cluster HCCA cluster: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000056.26 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.02 Gene family
Cpa|evm.model.tig00020614.58 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.02 Gene family
GSVIVT01015146001 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.02 Gene family
GSVIVT01016822001 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.06 Gene family
GSVIVT01028469001 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.05 Gene family
LOC_Os01g51634 Os01g0713900 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.04 Gene family
LOC_Os03g48140 Os03g0686300 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.06 Gene family
MA_10426662g0010 No alias 31.1.1.3.8 cell.organisation.cytoskeleton.Myosin.Class... 0.01 Gene family
MA_10433033g0020 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.01 Gene family
MA_16896g0010 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.04 Gene family
Smo103418 PACid_15408946 31.1.1.3.8 cell.organisation.cytoskeleton.Myosin.Class... 0.02 Gene family
Smo230820 PACid_15416869 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Solyc01g081545.1.1 Solyc01g081545.1 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Solyc06g008090.3.1 Solyc06g008090.3 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.12 Gene family
Solyc07g041150.3.1 Solyc07g041150.3 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.14 Gene family
Solyc08g061500.2.1 Solyc08g061500.2 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.02 Gene family
Solyc09g064200.3.1 Solyc09g064200.3 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Zm00001d018481 GRMZM2G034362,... 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.07 Gene family
Zm00001d019495 GRMZM2G139712,... 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.09 Gene family
Zm00001d021785 GRMZM2G057380 31.1.1.3.8 cell.organisation.cytoskeleton.Myosin.Class... 0.04 Gene family
Zm00001d032637 GRMZM2G113202 31.1.1.3.8 cell.organisation.cytoskeleton.Myosin.Class... 0.04 Gene family
Zm00001d044303 No alias 31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class... 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Arabidopsis.org
MF GO:0003774 motor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005777 peroxisome IDA Arabidopsis.org
BP GO:0010090 trichome morphogenesis IGI Arabidopsis.org
BP GO:0016049 cell growth RCA Arabidopsis.org
CC GO:0016459 myosin complex ISS Arabidopsis.org
MF GO:0017137 Rab GTPase binding IPI Arabidopsis.org
BP GO:0030048 actin filament-based movement RCA Arabidopsis.org
BP GO:0030048 actin filament-based movement TAS Arabidopsis.org
MF GO:0030742 GTP-dependent protein binding IPI Arabidopsis.org
BP GO:0048193 Golgi vesicle transport RCA Arabidopsis.org
BP GO:0048467 gynoecium development IGI Arabidopsis.org
BP GO:0048767 root hair elongation IMP Arabidopsis.org
BP GO:0051645 Golgi localization IMP Arabidopsis.org
BP GO:0051645 Golgi localization RCA Arabidopsis.org
BP GO:0051646 mitochondrion localization IMP Arabidopsis.org
BP GO:0051646 mitochondrion localization RCA Arabidopsis.org
BP GO:0060151 peroxisome localization IMP Arabidopsis.org
BP GO:0060151 peroxisome localization RCA Arabidopsis.org
BP GO:0090436 leaf pavement cell development IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 64 719
IPR002710 Dilute_dom 1329 1431
IPR000048 IQ_motif_EF-hand-BS 736 754
IPR000048 IQ_motif_EF-hand-BS 784 802
IPR000048 IQ_motif_EF-hand-BS 855 870
IPR000048 IQ_motif_EF-hand-BS 807 825
IPR000048 IQ_motif_EF-hand-BS 831 851
IPR000048 IQ_motif_EF-hand-BS 758 777
IPR004009 Myosin_N 13 48
No external refs found!