AT1G27470

Description : transducin family protein / WD-40 repeat family protein

Gene families : OG_01_0004823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004823_tree ,
OG_02_0004498 (LandPlants) Phylogenetic Tree(s): OG_02_0004498_tree ,
OG_03_0005446 (SeedPlants) Phylogenetic Tree(s): OG_03_0005446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G27470
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000852.39	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	Archaeplastida
Cre13.g606850	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	Archaeplastida
Mp5g05000.1	No alias	SSU processome assembly factor (UTP4/PCN)	0.04	Archaeplastida
Pp3c22_14490V3.1	No alias	Transducin family protein / WD-40 repeat family protein	0.04	Archaeplastida
Smo74975	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	Archaeplastida
Zm00001e012090_P001	No alias	SSU processome assembly factor (UTP4/PCN)	0.03	Archaeplastida
Mp5g05000.1	No alias	SSU processome assembly factor (UTP4/PCN)	0.03	LandPlants
Pp3c22_14490V3.1	No alias	Transducin family protein / WD-40 repeat family protein	0.02	LandPlants
GSVIVT01009321001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	SeedPlants
Zm00001e005587_P002	No alias	SSU processome assembly factor (UTP4/PCN)	0.01	SeedPlants
Zm00001e012090_P001	No alias	SSU processome assembly factor (UTP4/PCN)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	284	316
IPR001680	WD40_repeat	203	226

External Links

No external refs found!