AT5G42400 (SDG25, ATXR7)


Aliases : SDG25, ATXR7

Description : SET domain protein 25


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G42400
Cluster HCCA cluster: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000488.8 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.01 Gene family
Cre11.g475950 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Cre12.g515050 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
GSVIVT01006875001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
GSVIVT01027118001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
LOC_Os01g46700 Os01g0655250,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.09 Gene family
MA_10426105g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
MA_18041g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
MA_908464g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Smo164635 PACid_15412034 No description available 0.04 Gene family
Solyc01g095890.3.1 Solyc01g095890.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Solyc03g083410.3.1 Solyc03g083410.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.06 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.12 Gene family
Zm00001d039355 GRMZM2G085176,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
BP GO:0009909 regulation of flower development IMP Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Arabidopsis.org
BP GO:0010452 histone H3-K36 methylation IDA Arabidopsis.org
BP GO:0051568 histone H3-K4 methylation IGI Arabidopsis.org
BP GO:0051568 histone H3-K4 methylation ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 1278 1382
No external refs found!