Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Gene families : OG_01_0000457 (Gene family) Phylogenetic Tree(s): OG0000457_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): AT5G42140 | |
Cluster | HCCA cluster: Cluster_252 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G76950 | PRAF1 | Regulator of chromosome condensation (RCC1) family with... | 0.03 | Gene family | |
MA_54149g0010 | No alias | No description available | 0.02 | Gene family | |
Smo112120 | PACid_15411059 | No description available | 0.02 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | ISS | Arabidopsis.org |
CC | GO:0005576 | extracellular region | ISM | Arabidopsis.org |
BP | GO:0007165 | signal transduction | ISS | Arabidopsis.org |
MF | GO:0008270 | zinc ion binding | ISS | Arabidopsis.org |
MF | GO:0008536 | Ran GTPase binding | ISS | Arabidopsis.org |
MF | GO:0035091 | phosphatidylinositol binding | ISS | Arabidopsis.org |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000306 | Znf_FYVE | 617 | 683 |
IPR013591 | Brevis_radix_dom | 998 | 1053 |
IPR000408 | Reg_chr_condens | 460 | 507 |
IPR000408 | Reg_chr_condens | 398 | 446 |
IPR000408 | Reg_chr_condens | 512 | 561 |
IPR000408 | Reg_chr_condens | 566 | 613 |
IPR000408 | Reg_chr_condens | 343 | 394 |
IPR000408 | Reg_chr_condens | 291 | 339 |
IPR001849 | PH_domain | 13 | 118 |
IPR027988 | BRX_N | 864 | 899 |
No external refs found! |