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  5. Nbi_g32647

Nbi_g32647 (OTP84)


Aliases : OTP84

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000001 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g32647

Target Alias Description ECC score Gene Family Method Actions
Adi_g007616 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g083739 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g23959 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Cba_g71650 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g30128 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g36002 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Len_g04722 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g17723 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g63626 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g53382 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 348
IPR002885 Pentatricopeptide_repeat 527 554
IPR032867 DYW_dom 669 760
IPR002885 Pentatricopeptide_repeat 146 193
IPR002885 Pentatricopeptide_repeat 350 398
IPR002885 Pentatricopeptide_repeat 453 500
IPR002885 Pentatricopeptide_repeat 248 295
IPR046848 E_motif 571 630
No external refs found!