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  5. Nbi_g32626

Nbi_g32626 (MBD11, ATMBD11)


Aliases : MBD11, ATMBD11

Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g32626

Target Alias Description ECC score Gene Family Method Actions
Adi_g060317 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05923 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08851 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22400 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05773 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G023800.1 MBD11, ATMBD11,... methylation reader *(MBD10-11) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g07494 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11641 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03856 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g008170.2.1 MBD10, Solyc07g008170 methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species
Zm00001e017958_P001 MBD11, ATMBD11,... methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 17 81
No external refs found!