AT5G41520


Description : RNA binding Plectin/S10 domain-containing protein


Gene families : OG_01_0001887 (Gene family) Phylogenetic Tree(s): OG0001887_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G41520
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001164.5 No alias No description available 0.15 Gene family
Cre09.g411100 No alias 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01019409001 No alias 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.12 Gene family
GSVIVT01028854001 No alias 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os01g73160 Os01g0962600 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os04g35090 Os04g0430100 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.16 Gene family
MA_314020g0010 No alias 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.04 Gene family
Smo37555 PACid_15412990 No description available 0.08 Gene family
Solyc01g099670.3.1 Solyc01g099670.3 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.23 Gene family
Solyc12g096540.2.1 Solyc12g096540.2 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.21 Gene family
Zm00001d003672 GRMZM2G050925 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.12 Gene family
Zm00001d011816 GRMZM2G446960 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.13 Gene family
Zm00001d025413 GRMZM2G043737 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.18 Gene family
Zm00001d042023 GRMZM2G171484 29.2.1.2.1.10 protein.synthesis.ribosomal... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0010252 auxin homeostasis IGI Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit ISS Arabidopsis.org
BP GO:0090506 axillary shoot meristem initiation IGI Arabidopsis.org
BP GO:2000032 regulation of secondary shoot formation IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 95
No external refs found!