AT5G39860 (PRE1, BNQ1, BHLH136)


Aliases : PRE1, BNQ1, BHLH136

Description : basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG_01_0001019 (Gene family) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G39860
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G26945 KDR basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
AT3G28857 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 Gene family
AT5G15160 BNQ2, BHLH134 BANQUO 2 0.03 Gene family
GSVIVT01008030001 No alias No description available 0.03 Gene family
LOC_Os03g07540 Os03g0171700 No description available 0.02 Gene family
Solyc02g067380.3.1 Solyc02g067380.3 No description available 0.04 Gene family
Solyc03g112995.1.1 Solyc03g112995.1 No description available 0.05 Gene family
Zm00001d018056 GRMZM2G036092 No description available 0.04 Gene family
Zm00001d052254 GRMZM2G042101 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009640 photomorphogenesis IMP Arabidopsis.org
BP GO:0009741 response to brassinosteroid IEP Arabidopsis.org
BP GO:0009826 unidimensional cell growth IMP Arabidopsis.org
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 22 59
No external refs found!