AT5G39300 (ATEXPA25, ATEXP25,...)


Aliases : ATEXPA25, ATEXP25, EXPA25, ATHEXP ALPHA 1.18, EXP25

Description : expansin A25


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G39300
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Gene family
AT5G39260 EXPA21, EXP21,... expansin A21 0.03 Gene family
GSVIVT01016525001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
GSVIVT01024572001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
GSVIVT01032935001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc10g086520.2.1 Solyc10g086520.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d016027 GRMZM2G088791 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032884 GRMZM2G035189 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032885 GRMZM2G115909 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035102 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035109 GRMZM2G303937 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035112 GRMZM2G019398 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d043047 GRMZM2G339122 10.7 cell wall.modification Member of Alpha-Expansin... 0.01 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0009826 unidimensional cell growth ISS Arabidopsis.org
BP GO:0009826 unidimensional cell growth NAS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening ISS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening NAS Arabidopsis.org
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 74 157
IPR007117 Expansin_CBD 168 245
No external refs found!