AT5G39290 (ATEXP26, ATHEXP ALPHA...)


Aliases : ATEXP26, ATHEXP ALPHA 1.16, EXP26

Description : expansin A26


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G39290
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_474624g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Smo231226 PACid_15415243 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Smo91129 PACid_15413212 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc03g115270.2.1 Solyc03g115270.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc03g115300.2.1 Solyc03g115300.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc03g115310.1.1 Solyc03g115310.1 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0009826 unidimensional cell growth ISS Arabidopsis.org
BP GO:0009826 unidimensional cell growth NAS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening ISS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening NAS Arabidopsis.org
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 171 248
IPR009009 RlpA-like_DPBB 77 160
No external refs found!