AT5G39270 (EXPA22, ATEXP22,...)


Aliases : EXPA22, ATEXP22, ATHEXP ALPHA 1.15, ATEXPA22, EXP22

Description : expansin A22


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G39270
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_130258g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo231226 PACid_15415243 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Smo75237 PACid_15411282 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Smo91129 PACid_15413212 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035102 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0009826 unidimensional cell growth ISS Arabidopsis.org
BP GO:0009826 unidimensional cell growth NAS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening ISS Arabidopsis.org
BP GO:0009828 plant-type cell wall loosening NAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 77 160
IPR007117 Expansin_CBD 171 248
No external refs found!