AT5G38660 (APE1)


Aliases : APE1

Description : acclimation of photosynthesis to environment


Gene families : OG_01_0006388 (Gene family) Phylogenetic Tree(s): OG0006388_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G38660
Cluster HCCA cluster: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.155 No alias 1 PS mutant has Altered acclimation responses... 0.04 Gene family
Cre16.g665250 No alias 1 PS mutant has Altered acclimation responses... 0.07 Gene family
GSVIVT01036442001 No alias 1 PS mutant has Altered acclimation responses... 0.16 Gene family
LOC_Os08g27010 Os08g0359000 1 PS mutant has Altered acclimation responses... 0.13 Gene family
Smo117112 PACid_15403168 1 PS mutant has Altered acclimation responses... 0.09 Gene family
Solyc03g034170.3.1 Solyc03g034170.3 1 PS mutant has Altered acclimation responses... 0.2 Gene family
Zm00001d032380 GRMZM2G099367 1 PS mutant has Altered acclimation responses... 0.18 Gene family

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Arabidopsis.org
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009534 chloroplast thylakoid IDA Arabidopsis.org
CC GO:0009535 chloroplast thylakoid membrane IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0019252 starch biosynthetic process RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021275 DUF2854 110 260
No external refs found!