AT5G37780 (TCH1, CAM1, ACAM-1)


Aliases : TCH1, CAM1, ACAM-1

Description : calmodulin 1


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G37780
Cluster HCCA cluster: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.65 No alias 30.3 signalling.calcium encodes a calmodulin that is... 0.02 Gene family
Cpa|evm.model.tig00021435.44 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Cpa|evm.model.tig00021435.47 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
Cre03.g150300 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.01 Gene family
Cre03.g178150 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.06 Gene family
LOC_Os01g16240 Os01g0267900 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
LOC_Os05g41210 Os05g0491100 30.3 signalling.calcium encodes a calmodulin that is... 0.04 Gene family
MA_66144g0010 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.04 Gene family
Solyc11g072270.2.1 Solyc11g072270.2 29.4 protein.postranslational modification... 0.04 Gene family
Solyc12g099990.2.1 Solyc12g099990.2 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Zm00001d008278 GRMZM2G044963 30.3 signalling.calcium EF hand domain protein encodes a... 0.06 Gene family
Zm00001d040323 GRMZM2G067511 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Arabidopsis.org
MF GO:0005509 calcium ion binding NAS Arabidopsis.org
BP GO:0005513 detection of calcium ion ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0009612 response to mechanical stimulus IEP Arabidopsis.org
BP GO:0009612 response to mechanical stimulus RCA Arabidopsis.org
BP GO:0019722 calcium-mediated signaling RCA Arabidopsis.org
BP GO:0030048 actin filament-based movement RCA Arabidopsis.org
BP GO:0051645 Golgi localization RCA Arabidopsis.org
BP GO:0051646 mitochondrion localization RCA Arabidopsis.org
BP GO:0060151 peroxisome localization RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
IPR002048 EF_hand_dom 12 73
No external refs found!