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  5. Nbi_g32181

Nbi_g32181


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g32181

Target Alias Description ECC score Gene Family Method Actions
Aev_g36953 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18163.t1 CRR22, Aspi01Gene18163 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.06 OrthoFinder output from all 47 species
Cba_g20670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g67914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G019900.1 Ceric.02G019900 not classified & original description: pacid=50585305... 0.04 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.17G035100.1 Ceric.17G035100 not classified & original description: pacid=50618094... 0.04 OrthoFinder output from all 47 species
Ceric.17G079000.1 Ceric.17G079000 not classified & original description: pacid=50617699... 0.05 OrthoFinder output from all 47 species
Ceric.19G049000.1 Ceric.19G049000 not classified & original description: pacid=50576332... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.04 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.04 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.05 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10321 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03424 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g09671 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38952 OTP81 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21372 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 50 75
IPR002885 Pentatricopeptide_repeat 353 376
IPR002885 Pentatricopeptide_repeat 272 325
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 78 122
No external refs found!