AT5G36170 (ATPRFB, HCF109)


Aliases : ATPRFB, HCF109

Description : high chlorophyll fluorescent 109


Gene families : OG_01_0002295 (Gene family) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G36170
Cluster HCCA cluster: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Cre01.g010864 No alias 29.2.5 protein.synthesis.release Required for normal... 0.02 Gene family
Solyc04g025290.3.1 Solyc04g025290.3 29.2.5 protein.synthesis.release Required for normal... 0.03 Gene family
Zm00001d021715 GRMZM2G472382 29.2.5 protein.synthesis.release Required for normal... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006396 RNA processing IMP Arabidopsis.org
BP GO:0006415 translational termination IMP Arabidopsis.org
BP GO:0006415 translational termination ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009657 plastid organization IMP Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I_II 310 418
IPR005139 PCRF 107 299
No external refs found!