Smo104800

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase

Gene families : OG_01_0005341 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005341_tree ,
OG_02_0007253 (LandPlants) Phylogenetic Tree(s): OG_02_0007253_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo104800
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00116510	evm_27.TU.AmTr_v1...	RNA processing.RNA modification.dihydrouridylation.tRNA...	0.02	Archaeplastida
AT3G63510	No alias	FMN-linked oxidoreductases superfamily protein	0.02	Archaeplastida
LOC_Os04g20990.1	No alias	tRNA dihydrouridine synthase	0.03	Archaeplastida
Zm00001e008546_P006	No alias	tRNA dihydrouridine synthase	0.03	Archaeplastida
LOC_Os04g20990.1	No alias	tRNA dihydrouridine synthase	0.03	LandPlants
Zm00001e008546_P006	No alias	tRNA dihydrouridine synthase	0.03	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001269	DUS_fam	6	321

External Links

No external refs found!