AT5G35690


Description : CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0007966 (Gene family) Phylogenetic Tree(s): OG0007966_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G35690
Cluster HCCA cluster: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre16.g684000 No alias 29.5.7 protein.degradation.metalloprotease 0.01 Gene family
LOC_Os08g39150 Os08g0500800 29.5.7 protein.degradation.metalloprotease 0.07 Gene family
Zm00001d031338 GRMZM2G115981 29.5.7 protein.degradation.metalloprotease 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018997 PUB_domain 510 584
IPR013536 WLM_dom 156 329
No external refs found!