AT5G27770


Description : Ribosomal L22e protein family


Gene families : OG_01_0002101 (Gene family) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G27770
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.7 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.2 Gene family
Cre07.g357850 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.38 Gene family
GSVIVT01028021001 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.12 Gene family
GSVIVT01031130001 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.24 Gene family
GSVIVT01031158001 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.28 Gene family
GSVIVT01035141001 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.32 Gene family
LOC_Os03g22340 Os03g0343500 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.25 Gene family
LOC_Os07g47710 Os07g0674200 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.26 Gene family
MA_130453g0010 No alias 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.02 Gene family
Smo270704 PACid_15422421 No description available 0.07 Gene family
Solyc01g099830.3.1 Solyc01g099830.3 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.41 Gene family
Solyc09g075150.3.1 Solyc09g075150.3 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.21 Gene family
Solyc09g075160.3.1 Solyc09g075160.3 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.08 Gene family
Zm00001d007154 GRMZM2G010991 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.25 Gene family
Zm00001d022463 GRMZM2G063617 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.3 Gene family
Zm00001d047500 GRMZM2G134107 29.2.1.2.2.22 protein.synthesis.ribosomal... 0.07 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 14 122
No external refs found!