AT5G27530


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0000383 (Gene family) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G27530
Cluster HCCA cluster: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT4G35670 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT5G39910 No alias Pectin lyase-like superfamily protein 0.04 Gene family
GSVIVT01008061001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
GSVIVT01008062001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
GSVIVT01032118001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Arabidopsis.org
BP GO:0005975 carbohydrate metabolic process ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 84 398
No external refs found!