MA_9997953g0010


Description : Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana (sp|o22714|ppr86_arath : 281.0)


Gene families : OG_01_0000235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000235_tree ,
OG_02_0000298 (LandPlants) Phylogenetic Tree(s): OG_02_0000298_tree ,
OG_03_0030041 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9997953g0010
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00251490 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g02150... 0.06 Archaeplastida
AMTR_s00047p00194260 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g07590,... 0.02 Archaeplastida
AT3G15590 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01018303001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.04 Archaeplastida
GSVIVT01031246001 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.02 Archaeplastida
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
Gb_14212 No alias RNA editing factor (POCO) 0.02 Archaeplastida
Gb_14576 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Gb_20238 No alias RNA editing factor (POCO) 0.02 Archaeplastida
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 Archaeplastida
LOC_Os04g46010.1 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
LOC_Os10g35730.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
Smo444770 No alias Pentatricopeptide repeat-containing protein At3g15590,... 0.02 Archaeplastida
Solyc01g089870.3.1 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.06 Archaeplastida
Zm00001e007372_P001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.05 Archaeplastida
AMTR_s00024p00251490 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g02150... 0.03 LandPlants
GSVIVT01018303001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.04 LandPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
Gb_14212 No alias RNA editing factor (POCO) 0.02 LandPlants
Gb_14576 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 LandPlants
LOC_Os04g46010.1 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 LandPlants
LOC_Os10g35730.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.02 LandPlants
Solyc01g089870.3.1 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.05 LandPlants
Zm00001e007372_P001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.04 LandPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 19 64
IPR002885 Pentatricopeptide_repeat 306 320
IPR002885 Pentatricopeptide_repeat 200 226
IPR002885 Pentatricopeptide_repeat 93 120
IPR002885 Pentatricopeptide_repeat 163 188
No external refs found!