AT5G25630


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007943 (Gene family) Phylogenetic Tree(s): OG0007943_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G25630
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035672001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc07g032385.1.1 Solyc07g032385.1 29.4 protein.postranslational modification protein... 0.05 Gene family
Solyc08g068230.3.1 Solyc08g068230.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 257 287
IPR002885 Pentatricopeptide_repeat 114 160
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 186 231
IPR002885 Pentatricopeptide_repeat 397 443
No external refs found!