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  5. MA_9991417g0010

MA_9991417g0010


Description : component RPL4 of LSU proteome component


Gene families : OG_01_0002429 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002429_tree ,
OG_02_0002329 (LandPlants) Phylogenetic Tree(s): OG_02_0002329_tree ,
OG_03_0002237 (SeedPlants) Phylogenetic Tree(s): OG_03_0002237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9991417g0010
Cluster HCCA: Cluster_471

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00210590 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00105p00023120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AT3G09630 No alias Ribosomal protein L4/L1 family 0.13 Archaeplastida
AT5G02870 No alias Ribosomal protein L4/L1 family 0.16 Archaeplastida
Cpa|evm.model.tig00022075.53 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Cre09.g397697 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
GSVIVT01025547001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Gb_21885 No alias component RPL4 of LSU proteome component 0.09 Archaeplastida
LOC_Os03g58204.1 No alias component RPL4 of LSU proteome component 0.12 Archaeplastida
LOC_Os07g08330.1 No alias component RPL4 of LSU proteome component 0.12 Archaeplastida
Mp4g20310.1 No alias component RPL4 of LSU proteome component 0.12 Archaeplastida
Pp3c20_19140V3.1 No alias Ribosomal protein L4/L1 family 0.06 Archaeplastida
Pp3c23_6290V3.1 No alias Ribosomal protein L4/L1 family 0.06 Archaeplastida
Pp3c23_9380V3.1 No alias Ribosomal protein L4/L1 family 0.09 Archaeplastida
Pp3c24_3760V3.1 No alias Ribosomal protein L4/L1 family 0.12 Archaeplastida
Solyc09g007250.4.1 No alias component RPL4 of LSU proteome component 0.11 Archaeplastida
Solyc10g084350.2.1 No alias component RPL4 of LSU proteome component 0.16 Archaeplastida
Solyc10g086010.2.1 No alias component RPL4 of LSU proteome component 0.12 Archaeplastida
Zm00001e005988_P001 No alias component RPL4 of LSU proteome component 0.12 Archaeplastida
Zm00001e011456_P002 No alias component RPL4 of LSU proteome component 0.07 Archaeplastida
Zm00001e011869_P001 No alias component RPL4 of LSU proteome component 0.07 Archaeplastida
Zm00001e032938_P001 No alias component RPL4 of LSU proteome component 0.09 Archaeplastida
AMTR_s00023p00210590 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 LandPlants
AMTR_s00105p00023120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 LandPlants
AT3G09630 No alias Ribosomal protein L4/L1 family 0.13 LandPlants
AT5G02870 No alias Ribosomal protein L4/L1 family 0.14 LandPlants
GSVIVT01025547001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
Gb_21885 No alias component RPL4 of LSU proteome component 0.08 LandPlants
LOC_Os03g58204.1 No alias component RPL4 of LSU proteome component 0.1 LandPlants
LOC_Os07g08330.1 No alias component RPL4 of LSU proteome component 0.12 LandPlants
Mp4g20310.1 No alias component RPL4 of LSU proteome component 0.11 LandPlants
Pp3c20_19140V3.1 No alias Ribosomal protein L4/L1 family 0.06 LandPlants
Pp3c23_6290V3.1 No alias Ribosomal protein L4/L1 family 0.05 LandPlants
Pp3c23_9380V3.1 No alias Ribosomal protein L4/L1 family 0.07 LandPlants
Pp3c24_3760V3.1 No alias Ribosomal protein L4/L1 family 0.11 LandPlants
Solyc09g007250.4.1 No alias component RPL4 of LSU proteome component 0.1 LandPlants
Solyc10g084350.2.1 No alias component RPL4 of LSU proteome component 0.15 LandPlants
Solyc10g086010.2.1 No alias component RPL4 of LSU proteome component 0.11 LandPlants
Zm00001e005988_P001 No alias component RPL4 of LSU proteome component 0.11 LandPlants
Zm00001e011456_P002 No alias component RPL4 of LSU proteome component 0.05 LandPlants
Zm00001e011869_P001 No alias component RPL4 of LSU proteome component 0.05 LandPlants
Zm00001e032938_P001 No alias component RPL4 of LSU proteome component 0.06 LandPlants
AMTR_s00023p00210590 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 SeedPlants
AMTR_s00105p00023120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 SeedPlants
AT3G09630 No alias Ribosomal protein L4/L1 family 0.13 SeedPlants
AT5G02870 No alias Ribosomal protein L4/L1 family 0.14 SeedPlants
GSVIVT01025547001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 SeedPlants
Gb_21885 No alias component RPL4 of LSU proteome component 0.07 SeedPlants
LOC_Os03g58204.1 No alias component RPL4 of LSU proteome component 0.1 SeedPlants
LOC_Os07g08330.1 No alias component RPL4 of LSU proteome component 0.11 SeedPlants
Solyc09g007250.4.1 No alias component RPL4 of LSU proteome component 0.1 SeedPlants
Solyc10g084350.2.1 No alias component RPL4 of LSU proteome component 0.15 SeedPlants
Solyc10g086010.2.1 No alias component RPL4 of LSU proteome component 0.1 SeedPlants
Zm00001e005988_P001 No alias component RPL4 of LSU proteome component 0.11 SeedPlants
Zm00001e011456_P002 No alias component RPL4 of LSU proteome component 0.04 SeedPlants
Zm00001e011869_P001 No alias component RPL4 of LSU proteome component 0.05 SeedPlants
Zm00001e032938_P001 No alias component RPL4 of LSU proteome component 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 139 162
IPR002136 Ribosomal_L4/L1e 16 125
No external refs found!