AT5G25190


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G25190
Cluster HCCA cluster: Cluster_474

Target Alias Description ECC score Gene Family Method Actions
AT2G40350 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Gene family
GSVIVT01011465001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
GSVIVT01016684001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01021098001 No alias No description available 0.02 Gene family
LOC_Os02g34260 Os02g0546600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g54160 Os02g0782700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os07g47790 Os07g0674800 No description available 0.01 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_314205g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_67707g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009740 gibberellic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009873 ethylene-activated signaling pathway TAS Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!