AT5G22890


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG_01_0001025 (Gene family) Phylogenetic Tree(s): OG0001025_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G22890
Cluster HCCA cluster: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01004847001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
GSVIVT01031459001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.05 Gene family
GSVIVT01034505001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
LOC_Os08g44830 Os08g0562300 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.05 Gene family
LOC_Os12g07280 Os12g0170400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Smo58350 PACid_15406379 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Smo58353 PACid_15406381 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Solyc11g066420.1.1 Solyc11g066420.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0006826 iron ion transport RCA Arabidopsis.org
BP GO:0010106 cellular response to iron ion starvation RCA Arabidopsis.org
BP GO:0010167 response to nitrate RCA Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
BP GO:0015706 nitrate transport RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!