AT5G22760


Description : PHD finger family protein


Gene families : OG_01_0003405 (Gene family) Phylogenetic Tree(s): OG0003405_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G22760
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g46690 Os07g0661500,... 27.3.63 RNA.regulation of transcription.PHD finger... 0.03 Gene family
Smo441144 PACid_15405523 No description available 0.02 Gene family
Solyc11g066780.2.1 Solyc11g066780.2 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Zm00001d004925 GRMZM2G403562 29.5 protein.degradation metalloendopeptidaseszinc ion... 0.02 Gene family
Zm00001d023391 GRMZM2G314661 29.5 protein.degradation metalloendopeptidaseszinc ion... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009630 gravitropism RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR028942 WHIM1_dom 300 333
IPR018501 DDT_dom 188 240
IPR019787 Znf_PHD-finger 416 459
No external refs found!