AT5G21960


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G21960
Cluster HCCA cluster: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.02 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.04 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G65130 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013935001 No alias No description available 0.04 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01020584001 No alias No description available 0.04 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.04 Gene family
LOC_Os02g34270 No alias No description available 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.04 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.05 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_164803g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27642g0010 No alias No description available 0.02 Gene family
MA_4032g0010 No alias No description available 0.06 Gene family
MA_46347g0010 No alias No description available 0.03 Gene family
MA_502153g0010 No alias No description available 0.03 Gene family
MA_81029g0010 No alias No description available 0.04 Gene family
MA_82481g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_8984558g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Smo73155 PACid_15404551 No description available 0.03 Gene family
Smo80895 PACid_15408472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.05 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.04 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.04 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.04 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.09 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.07 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.03 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.03 Gene family
Solyc04g014530.1.1 Solyc04g014530.1 No description available 0.07 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.04 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.03 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.07 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.11 Gene family
Solyc09g066350.1.1 Solyc09g066350.1 No description available 0.02 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.04 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.09 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.05 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.03 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.04 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.04 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.09 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.04 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.04 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d027870 GRMZM2G419901 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027929 No alias No description available 0.04 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.1 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.03 Gene family
Zm00001d045120 GRMZM2G156006 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d052102 GRMZM2G097081 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.09 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 5 55
No external refs found!