AT5G20890


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG_01_0005586 (Gene family) Phylogenetic Tree(s): OG0005586_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G20890
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.30 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Cre09.g416750 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.09 Gene family
GSVIVT01008708001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.08 Gene family
LOC_Os03g42220 Os03g0619400 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.16 Gene family
MA_10434959g0010 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.07 Gene family
Smo171093 PACid_15405948 No description available 0.05 Gene family
Solyc11g069000.2.1 Solyc11g069000.2 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.13 Gene family
Zm00001d008369 GRMZM2G058276 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.13 Gene family
Zm00001d040257 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.17 Gene family

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006094 gluconeogenesis RCA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0007010 cytoskeleton organization RCA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
BP GO:0010498 proteasomal protein catabolic process RCA Arabidopsis.org
BP GO:0042545 cell wall modification RCA Arabidopsis.org
CC GO:0046658 anchored component of plasma membrane IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 30 517
No external refs found!