AT5G20570 (HRT1, ATRBX1, RBX1, ROC1)


Aliases : HRT1, ATRBX1, RBX1, ROC1

Description : RING-box 1


Gene families : OG_01_0002258 (Gene family) Phylogenetic Tree(s): OG0002258_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G20570
Cluster HCCA cluster: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.7 No alias 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.03 Gene family
Cre12.g543450 No alias 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.06 Gene family
GSVIVT01016736001 No alias 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.03 Gene family
LOC_Os01g01700 Os01g0106800 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.03 Gene family
Solyc12g009120.2.1 Solyc12g009120.2 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.04 Gene family
Zm00001d008428 GRMZM2G035341 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.03 Gene family
Zm00001d040164 GRMZM2G057150 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0009733 response to auxin IMP Arabidopsis.org
BP GO:0009853 photorespiration RCA Arabidopsis.org
BP GO:0016567 protein ubiquitination TAS Arabidopsis.org
BP GO:0016925 protein sumoylation RCA Arabidopsis.org
CC GO:0019005 SCF ubiquitin ligase complex IPI Arabidopsis.org
CC GO:0031463 Cul3-RING ubiquitin ligase complex IPI Arabidopsis.org
BP GO:0042023 DNA endoreduplication RCA Arabidopsis.org
BP GO:0042752 regulation of circadian rhythm RCA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0051510 regulation of unidimensional cell growth RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
BP GO:0080129 proteasome core complex assembly RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 50 108
No external refs found!