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AT1G25440


Description : B-box type zinc finger protein with CCT domain


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G25440
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Cre15.g635100 No alias No description available 0.02 Archaeplastida
GSVIVT01010855001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.08 Archaeplastida
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
MA_10428386g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c4_7080V3.1 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
Pp3c8_1870V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Solyc05g009310.3.1 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
Zm00001e012194_P001 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.06 LandPlants
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.03 LandPlants
Pp3c18_13350V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.03 LandPlants
Solyc05g009310.3.1 No alias transcription factor (BBX-CO) 0.05 LandPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.02 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 SeedPlants
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.05 SeedPlants
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.03 SeedPlants
MA_10428386g0020 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 SeedPlants
Solyc05g009310.3.1 No alias transcription factor (BBX-CO) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 14 57
IPR010402 CCT_domain 361 403
No external refs found!