AT5G18820 (EMB3007)


Aliases : EMB3007

Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G18820
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cre04.g231222 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.03 Gene family
Cre06.g309100 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
Cre07.g339150 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
GSVIVT01012098001 No alias 29.6 protein.folding embryo defective 3007 (EMB3007) 0.05 Gene family
GSVIVT01016859001 No alias 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.03 Gene family
GSVIVT01017032001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.07 Gene family
GSVIVT01025490001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.07 Gene family
GSVIVT01031526001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
LOC_Os06g02380 Os06g0114000 No description available 0.02 Gene family
LOC_Os09g38980 Os09g0563300 29.6 protein.folding embryo defective 3007 (EMB3007) 0.07 Gene family
LOC_Os12g17910 Os12g0277500 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
MA_10436772g0010 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.03 Gene family
MA_97627g0010 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
Smo168153 PACid_15419933 No description available 0.06 Gene family
Smo405358 PACid_15412394 No description available 0.03 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.1 Gene family
Solyc03g120850.3.1 Solyc03g120850.3 No description available 0.02 Gene family
Solyc03g121640.3.1 Solyc03g121640.3 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.02 Gene family
Zm00001d000399 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.05 Gene family
Zm00001d014090 GRMZM2G111477,... 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
Zm00001d028409 GRMZM2G042253 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.08 Gene family

Type GO Term Name Evidence Source
BP GO:0006457 protein folding RCA Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009408 response to heat RCA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009644 response to high light intensity RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
BP GO:0034976 response to endoplasmic reticulum stress RCA Arabidopsis.org
BP GO:0042542 response to hydrogen peroxide RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 55 558
No external refs found!