AT5G18560 (PUCHI)


Aliases : PUCHI

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G18560
Cluster HCCA cluster: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.03 Gene family
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT1G78080 RAP2.4 related to AP2 4 0.03 Gene family
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.06 Gene family
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.05 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01002195001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01035852001 No alias No description available 0.04 Gene family
GSVIVT01036228001 No alias No description available 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_27642g0010 No alias No description available 0.03 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_46347g0010 No alias No description available 0.03 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
Smo38494 PACid_15415269 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Smo80895 PACid_15408472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Smo92334 PACid_15417654 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Solyc05g052040.1.1 Solyc05g052040.1 No description available 0.03 Gene family
Solyc09g091950.1.1 Solyc09g091950.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d015639 GRMZM2G079653 No description available 0.03 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.03 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d039019 GRMZM2G317596 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d043204 GRMZM2G002119 No description available 0.04 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009908 flower development IMP Arabidopsis.org
BP GO:0010102 lateral root morphogenesis IMP Arabidopsis.org
BP GO:0010432 bract development IMP Arabidopsis.org
BP GO:0010432 bract development IGI Arabidopsis.org
BP GO:0010451 floral meristem growth IMP Arabidopsis.org
BP GO:0010582 floral meristem determinacy IMP Arabidopsis.org
BP GO:0010582 floral meristem determinacy IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 57 103
No external refs found!