AT5G18450


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G18450
Cluster HCCA cluster: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.04 Gene family
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.03 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
Cre14.g620500 No alias No description available 0.01 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01015540001 No alias No description available 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
GSVIVT01036201001 No alias No description available 0.03 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43820 Os02g0655200 No description available 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os04g46250 Os04g0547600 No description available 0.04 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.04 Gene family
LOC_Os05g36100 Os05g0437050,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g45110 Os08g0565200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_180106g0010 No alias No description available 0.02 Gene family
MA_19683g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_24801g0010 No alias No description available 0.03 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_3405g0010 No alias No description available 0.03 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_502153g0010 No alias No description available 0.02 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.02 Gene family
Solyc03g117130.3.1 Solyc03g117130.3 No description available 0.05 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc05g013540.1.1 Solyc05g013540.1 No description available 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.06 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.05 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d008665 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d010175 GRMZM2G457562 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.03 Gene family
Zm00001d017466 GRMZM2G057386 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.04 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d030862 GRMZM2G039112 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.06 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.03 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.02 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 34 83
No external refs found!