AT5G17990 (TRP1, pat1)


Aliases : TRP1, pat1

Description : tryptophan biosynthesis 1


Gene families : OG_01_0005578 (Gene family) Phylogenetic Tree(s): OG0005578_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G17990
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Zm00001d048461 GRMZM2G051219 13.1.6.5.2 amino acid metabolism.synthesis.aromatic... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IMP Arabidopsis.org
BP GO:0000162 tryptophan biosynthetic process ISS Arabidopsis.org
MF GO:0004048 anthranilate phosphoribosyltransferase activity ISS Arabidopsis.org
MF GO:0004048 anthranilate phosphoribosyltransferase activity TAS Arabidopsis.org
BP GO:0006569 tryptophan catabolic process RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009536 plastid IDA Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009627 systemic acquired resistance RCA Arabidopsis.org
BP GO:0009684 indoleacetic acid biosynthetic process RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0034976 response to endoplasmic reticulum stress RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR017459 Glycosyl_Trfase_fam3_N_dom 110 170
IPR000312 Glycosyl_Trfase_fam3 178 426
No external refs found!