AT5G17800 (MYB56, AtMYB56)


Aliases : MYB56, AtMYB56

Description : myb domain protein 56


Gene families : OG_01_0000044 (Gene family) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G17800
Cluster HCCA cluster: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Gene family
AT5G40430 MYB22, AtMYB22 myb domain protein 22 0.03 Gene family
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Gene family
LOC_Os02g09480 Os02g0187700 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os05g38460 Os05g0459000 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_10225049g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Smo75978 PACid_15416667 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc02g092930.1.1 Solyc02g092930.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.06 Gene family
Solyc04g079360.1.1 Solyc04g079360.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc10g081320.1.1 Solyc10g081320.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc12g005640.2.1 Solyc12g005640.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d008251 GRMZM2G312419 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d015614 GRMZM2G145444 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d032194 GRMZM2G428555 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d036768 GRMZM2G078820 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d046632 GRMZM5G803308 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 138
IPR001005 SANT/Myb 145 188
No external refs found!