AT5G16680


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0003667 (Gene family) Phylogenetic Tree(s): OG0003667_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G16680
Cluster HCCA cluster: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024330001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.07 Gene family
LOC_Os11g18770 Os11g0292050,... 27.3.99 RNA.regulation of transcription.unclassified... 0.06 Gene family
LOC_Os12g24540 Os12g0433133,... 27.3.99 RNA.regulation of transcription.unclassified... 0.08 Gene family
MA_106351g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.14 Gene family
Solyc03g097260.3.1 Solyc03g097260.3 27.3.99 RNA.regulation of transcription.unclassified... 0.12 Gene family
Zm00001d035933 GRMZM2G103230 27.3.99 RNA.regulation of transcription.unclassified... 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006486 protein glycosylation RCA Arabidopsis.org
BP GO:0009630 gravitropism RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!