MA_98506g0010


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0001322 (LandPlants) Phylogenetic Tree(s): OG_02_0001322_tree ,
OG_03_0001040 (SeedPlants) Phylogenetic Tree(s): OG_03_0001040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_98506g0010
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016266001 No alias Auxin response factor 18 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Gb_23186 No alias transcription factor (ARF) 0.07 Archaeplastida
Pp3c1_14480V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Zm00001e030290_P005 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e041866_P001 No alias transcription factor (ARF) 0.03 Archaeplastida
GSVIVT01016266001 No alias Auxin response factor 18 OS=Oryza sativa subsp. japonica 0.04 LandPlants
Pp3c4_13010V3.1 No alias auxin response factor 16 0.01 LandPlants
GSVIVT01016266001 No alias Auxin response factor 18 OS=Oryza sativa subsp. japonica 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 308 389
IPR003340 B3_DNA-bd 131 232
No external refs found!