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  5. Nbi_g30589

Nbi_g30589


Description : not classified & original description: none


Gene families : OG0010461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30589
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Aop_g20869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G091200.1 Ceric.01G091200 not classified & original description: pacid=50591012... 0.04 OrthoFinder output from all 47 species
Dac_g09613 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47980 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g45384 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 60 139
No external refs found!