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  5. Nbi_g30562

Nbi_g30562 (pde194)


Aliases : pde194

Description : methionyl-tRNA formyltransferase & original description: none


Gene families : OG0004687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004687_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30562

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021590.15 pde194 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002376 Formyl_transf_N 75 259
IPR005793 Formyl_trans_C 287 400
No external refs found!