AT5G15450 (CLPB3, CLPB-P, APG6)

Aliases : CLPB3, CLPB-P, APG6

Description : casein lytic proteinase B3

Gene families : OG_01_0000281 (Gene family) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT5G15450
Cluster	HCCA cluster: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Cre11.g467644	No alias	No description available	0.03	Gene family
GSVIVT01007880001	No alias	No description available	0.09	Gene family
GSVIVT01011496001	No alias	20.2.1 stress.abiotic.heat Encodes a...	0.08	Gene family
GSVIVT01035900001	No alias	No description available	0.04	Gene family
LOC_Os02g08490	Os02g0181900	No description available	0.08	Gene family
LOC_Os03g31300	Os03g0426900	20.2.1 stress.abiotic.heat Encodes a...	0.08	Gene family
LOC_Os05g44340	Os05g0519700	No description available	0.08	Gene family
MA_763g0010	No alias	No description available	0.02	Gene family
Smo170696	PACid_15407546	No description available	0.06	Gene family
Smo174539	PACid_15418459	No description available	0.06	Gene family
Smo411118	PACid_15406211	No description available	0.08	Gene family
Solyc02g088610.3.1	Solyc02g088610.3	20.2.1 stress.abiotic.heat Encodes a...	0.05	Gene family
Solyc03g115230.3.1	Solyc03g115230.3	No description available	0.06	Gene family
Solyc06g011370.3.1	Solyc06g011370.3	No description available	0.03	Gene family
Zm00001d003894	GRMZM2G001084	No description available	0.02	Gene family
Zm00001d015520	GRMZM2G060561	No description available	0.02	Gene family
Zm00001d025273	GRMZM2G123922	No description available	0.03	Gene family
Zm00001d029557	GRMZM2G130121	20.2.1 stress.abiotic.heat Encodes a...	0.08	Gene family
Zm00001d038806	GRMZM2G360681	No description available	0.1	Gene family
Zm00001d047302	GRMZM2G162968	20.2.1 stress.abiotic.heat Encodes a...	0.11	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Arabidopsis.org
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEP	Arabidopsis.org
BP	GO:0009408	response to heat	ISS	Arabidopsis.org
CC	GO:0009507	chloroplast	IDA	Arabidopsis.org
CC	GO:0009532	plastid stroma	IDA	Arabidopsis.org
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Arabidopsis.org
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IMP	Arabidopsis.org
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	ISS	Arabidopsis.org
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004176	Clp_N	170	221
IPR004176	Clp_N	95	144
IPR003959	ATPase_AAA_core	676	843
IPR019489	Clp_ATPase_C	850	928
IPR003959	ATPase_AAA_core	279	411

External Links

No external refs found!

AT5G15450 (CLPB3, CLPB-P, APG6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation