AT5G14870 (CNGC18, ATCNGC18)


Aliases : CNGC18, ATCNGC18

Description : cyclic nucleotide-gated channel 18


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G14870
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007785001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01015970001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os12g06570 Os12g0163000,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os12g28260 Os12g0468500 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
MA_10428782g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Zm00001d013688 GRMZM2G077828 34.22 transport.cyclic nucleotide or calcium regulated... 0.1 Gene family
Zm00001d041309 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity ISS Arabidopsis.org
MF GO:0005516 calmodulin binding ISS Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0006874 cellular calcium ion homeostasis IDA Arabidopsis.org
BP GO:0009827 plant-type cell wall modification RCA Arabidopsis.org
BP GO:0009860 pollen tube growth IMP Arabidopsis.org
BP GO:0009860 pollen tube growth RCA Arabidopsis.org
CC GO:0016324 apical plasma membrane IDA Arabidopsis.org
MF GO:0030551 cyclic nucleotide binding ISS Arabidopsis.org
BP GO:0048868 pollen tube development RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 472 559
IPR005821 Ion_trans_dom 49 377
No external refs found!